EnhancerDB
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  3. rs4520409[chr1:39425659]
Enhancers that have rs4520409[chr1:39425659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs4520409[chr1:39425659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39425649 39425666 RXRA JASPAR yes 28244283
chr1 39425657 39425670 NR2F1 JASPAR yes 28244285
Genes associated with rs4520409[chr1:39425659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More