EnhancerDB
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  3. rs4540653[chr1:15515068]
Enhancers that have rs4540653[chr1:15515068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15498831 15536635 enh11531
Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4540653[chr1:15515068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15515055 15515068 SCRT2 JASPAR yes 26968686
chr1 15515055 15515070 SCRT1 JASPAR yes 26968687
chr1 15515068 15515073 GATA2 JASPAR yes 26968688
Genes associated with rs4540653[chr1:15515068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More