EnhancerDB
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  3. rs4560643[chr6:42014140]
Enhancers that have rs4560643[chr6:42014140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42004605 42015829 enh9109
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4560643[chr6:42014140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42014136 42014141 ETS2 TRANSFAC yes 101689892
chr6 42014138 42014149 FOSL1 JASPAR yes 101689893
chr6 42014139 42014150 FOSL2 JASPAR yes 101689894
chr6 42014139 42014150 JUNB JASPAR yes 101689895
chr6 42014139 42014153 JUN JASPAR yes 101689896
chr6 42014140 42014151 BATF JASPAR yes 101689897
Genes associated with rs4560643[chr6:42014140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More