EnhancerDB
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  3. rs4590736[chr1:212408905]
Enhancers that have rs4590736[chr1:212408905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs4590736[chr1:212408905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212408729 212409065 ZNF274 GTRD no Bone Marrow (K562) 21378246
chr1 212408884 212408905 IRF1 JASPAR yes 35113190
chr1 212408885 212408906 IRF1 JASPAR yes 35113192
chr1 212408886 212408907 IRF1 JASPAR yes 35113194
chr1 212408887 212408908 IRF1 JASPAR yes 35113196
chr1 212408888 212408909 IRF1 JASPAR yes 35113198
chr1 212408889 212408910 IRF1 JASPAR yes 35113200
chr1 212408890 212408905 FOXP1 JASPAR yes 35113201
chr1 212408892 212408907 FOXP1 JASPAR yes 35113202
chr1 212408893 212408914 IRF1 JASPAR yes 35113203
chr1 212408894 212408909 FOXP1 JASPAR yes 35113204
chr1 212408897 212408911 SPIC JASPAR yes 35113205
chr1 212408897 212408911 STAT1 JASPAR yes 35113206
chr1 212408897 212408912 PRDM1 JASPAR yes 35113207
chr1 212408897 212408912 STAT2 JASPAR yes 35113208
chr1 212408897 212408918 IRF1 JASPAR yes 35113209
chr1 212408899 212408920 IRF1 JASPAR yes 35113210
chr1 212408905 212408926 IRF1 JASPAR yes 35113211
Genes associated with rs4590736[chr1:212408905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More