EnhancerDB
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  3. rs4627554[chr2:228726958]
Enhancers that have rs4627554[chr2:228726958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228723845 228730696 enh19291
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Liver Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs4627554[chr2:228726958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228726951 228726972 IRF1 JASPAR yes 81553452
chr2 228726952 228726962 NFATC3 JASPAR yes 81553453
chr2 228726954 228726961 NFATC2 JASPAR yes 81553454
chr2 228726955 228726970 STAT2 JASPAR yes 81553455
Genes associated with rs4627554[chr2:228726958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More