EnhancerDB
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  3. rs4653438[chr1:226221390]
Enhancers that have rs4653438[chr1:226221390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226213300 226224732 enh43161
Bone Marrow (K562) Prostate (PC-3) Large Intestine Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs4653438[chr1:226221390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226220434 226221400 ZNF143 GTRD no Epithelial (MCF-7) 21386305
chr1 226220446 226221458 ZNF143 GTRD no Epithelial (MCF-7) 21386306
chr1 226220446 226221458 ZNF143 GTRD no Epithelial (MCF-7) 107875433
chr1 226220692 226221469 ZNF274 GTRD no Bone Marrow (K562) 21386321
chr1 226220692 226221469 ZNF274 GTRD no Bone Marrow (K562) 107875434
chr1 226221385 226221403 NR3C1 JASPAR yes 35786680
chr1 226221386 226221407 IRF1 JASPAR yes 35786681
chr1 226221388 226221403 STAT2 JASPAR yes 35786682
chr1 226221389 226221403 SPIC JASPAR yes 35786683
chr1 226221389 226221403 STAT1 JASPAR yes 35786684
chr1 226221390 226221404 IRF7 JASPAR yes 35786685
chr1 226221390 226221404 IRF8 JASPAR yes 35786686
chr1 226221390 226221405 IRF9 JASPAR yes 35786687
Genes associated with rs4653438[chr1:226221390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More