EnhancerDB
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  3. rs4658346[chr1:90418691]
Enhancers that have rs4658346[chr1:90418691]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs4658346[chr1:90418691]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90418683 90418695 GLI2 JASPAR yes 30638078
chr1 90418683 90418698 RUNX2 JASPAR yes 30638079
chr1 90418684 90418693 RUNX2 JASPAR yes 30638080
chr1 90418684 90418694 RUNX3 JASPAR yes 30638081
Genes associated with rs4658346[chr1:90418691], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More