EnhancerDB
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  3. rs4658879[chr1:231742575]
Enhancers that have rs4658879[chr1:231742575]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231730145 231744675 enh987
Heart Brain (SK-N-SH) Brain (SK-N-MC) Bone (Osteoblast) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs4658879[chr1:231742575]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231742571 231742575 YY1 TRANSFAC yes 36104037
chr1 231742573 231742583 ALX3 JASPAR yes 36104038
chr1 231742573 231742583 GSX2 JASPAR yes 36104039
chr1 231742573 231742583 MNX1 JASPAR yes 36104040
chr1 231742574 231742582 LMX1A JASPAR yes 36104041
chr1 231742574 231742582 LMX1B JASPAR yes 36104042
chr1 231742574 231742582 NKX6-1 JASPAR yes 36104043
chr1 231742574 231742582 NKX6-2 JASPAR yes 36104044
chr1 231742574 231742582 VAX1 JASPAR yes 36104045
chr1 231742574 231742582 VAX2 JASPAR yes 36104046
chr1 231742574 231742582 VSX1 JASPAR yes 36104047
chr1 231742574 231742582 VSX2 JASPAR yes 36104048
Genes associated with rs4658879[chr1:231742575], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More