EnhancerDB
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  3. rs4665411[chr2:28582193]
Enhancers that have rs4665411[chr2:28582193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4665411[chr2:28582193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28582091 28582429 JUND UCSC Txn Factor no Conserved 108431599
chr2 28582129 28582515 RUNX3 UCSC Txn Factor no Conserved 108431600
chr2 28582132 28582743 MAX UCSC Txn Factor no Conserved 108431601
chr2 28582147 28582403 ATF1 UCSC Txn Factor no Conserved 108431602
chr2 28582180 28582200 TP63 JASPAR yes 22024460
chr2 28582180 28582200 TP63 JASPAR yes 72641609
chr2 28582181 28582199 TP63 JASPAR yes 22024461
chr2 28582181 28582199 TP73 JASPAR yes 22024462
chr2 28582181 28582199 TP63 JASPAR yes 72641610
chr2 28582181 28582199 TP73 JASPAR yes 72641611
chr2 28582183 28582198 TP53 JASPAR yes 22024463
chr2 28582183 28582198 TP53 JASPAR yes 72641612
chr2 28582187 28582196 THAP1 JASPAR yes 22024464
chr2 28582187 28582196 THAP1 JASPAR yes 72641613
chr2 28582190 28582194 LFA1 TRANSFAC yes 72641614
Genes associated with rs4665411[chr2:28582193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More