EnhancerDB
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  3. rs4712560[chr6:10313428]
Enhancers that have rs4712560[chr6:10313428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 10296185 10320275 enh22999
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs4712560[chr6:10313428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 10313418 10313428 HOXA13 JASPAR yes 99818276
chr6 10313418 10313428 HOXB13 JASPAR yes 99818277
chr6 10313418 10313428 HOXD13 JASPAR yes 99818278
chr6 10313418 10313429 HOXA10 JASPAR yes 99818279
chr6 10313419 10313428 CDX1 JASPAR yes 99818280
chr6 10313419 10313430 CDX2 JASPAR yes 99818281
Genes associated with rs4712560[chr6:10313428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More