EnhancerDB
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  3. rs471828[chr1:16221030]
Enhancers that have rs471828[chr1:16221030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16216545 16234615 enh82
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Stomach
Transcript factors that have rs471828[chr1:16221030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16221020 16221031 RUNX1 JASPAR yes 27012007
chr1 16221025 16221046 IRF1 JASPAR yes 27012008
chr1 16221026 16221041 FOXP1 JASPAR yes 27012009
chr1 16221026 16221047 IRF1 JASPAR yes 27012010
chr1 16221027 16221048 IRF1 JASPAR yes 27012011
chr1 16221028 16221043 FOXP1 JASPAR yes 27012012
chr1 16221028 16221049 IRF1 JASPAR yes 27012013
chr1 16221029 16221050 IRF1 JASPAR yes 27012014
chr1 16221030 16221045 FOXP1 JASPAR yes 27012015
chr1 16221030 16221051 IRF1 JASPAR yes 27012016
Genes associated with rs471828[chr1:16221030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More