EnhancerDB
  1. Home
  2. SNP
  3. rs4788156[chr16:29312217]
Enhancers that have rs4788156[chr16:29312217]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29294585 29314235 enh16624
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs4788156[chr16:29312217]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29311364 29312751 ZNF143 GTRD no Epithelial (MCF-7) 21702346
chr16 29311364 29312751 ZNF143 GTRD no Epithelial (MCF-7) 108191480
chr16 29311380 29312262 ZNF143 GTRD no Epithelial (MCF-7) 21702347
chr16 29311380 29312262 ZNF143 GTRD no Epithelial (MCF-7) 108191481
chr16 29311401 29312818 ZNF143 GTRD no Epithelial (MCF-7) 21702348
chr16 29311401 29312818 ZNF143 GTRD no Epithelial (MCF-7) 108191482
chr16 29311839 29312298 ZNF143 GTRD no Epithelial (MCF-7) 21702352
chr16 29312217 29312223 GATA3 JASPAR yes 10259405
Genes associated with rs4788156[chr16:29312217], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More