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- rs4790878[chr17:2023244]
Enhancers that have rs4790878[chr17:2023244]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
2019805 |
2030715 |
enh4205 |
|
|
Transcript factors that have rs4790878[chr17:2023244]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
2021879
|
2026536
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108229727
|
|
|
chr17
|
2022562
|
2026426
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229728
|
|
|
chr17
|
2022575
|
2026421
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229729
|
|
|
chr17
|
2023082
|
2026419
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229730
|
|
|
chr17
|
2023120
|
2026389
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108229731
|
|
|
chr17
|
2023235
|
2023246
|
FOSL2
|
JASPAR
|
yes
|
|
52726046
|
|
|
chr17
|
2023242
|
2023256
|
MTF1
|
JASPAR
|
yes
|
|
52726047
|
|
|
chr17
|
2023244
|
2023261
|
PAX1
|
JASPAR
|
yes
|
|
52726048
|
|
|
chr17
|
2023244
|
2023261
|
PAX9
|
JASPAR
|
yes
|
|
52726049
|
|
Genes associated with rs4790878[chr17:2023244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |