EnhancerDB
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Enhancers that have rs4793793[chr17:53517616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4793793[chr17:53517616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53517611 53517624 POU2F2 JASPAR yes 54850975
chr17 53517612 53517624 POU3F2 JASPAR yes 54850976
chr17 53517612 53517627 PRDM1 JASPAR yes 54850977
chr17 53517613 53517617 YY1 TRANSFAC yes 54850978
chr17 53517614 53517628 IRF7 JASPAR yes 54850979
Genes associated with rs4793793[chr17:53517616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More