EnhancerDB
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  3. rs4793794[chr17:53519123]
Enhancers that have rs4793794[chr17:53519123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4793794[chr17:53519123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53519117 53519123 NFIC JASPAR yes 54851194
chr17 53519119 53519123 H1TF2 TRANSFAC yes 54851195
chr17 53519119 53519123 NFE TRANSFAC yes 54851196
chr17 53519119 53519123 SRF TRANSFAC yes 54851197
Genes associated with rs4793794[chr17:53519123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More