EnhancerDB
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  3. rs4794587[chr17:53517117]
Enhancers that have rs4794587[chr17:53517117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4794587[chr17:53517117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53516504 53517324 ZNF143 GTRD no Epithelial (MCF-7) 21772609
chr17 53516518 53517237 ZNF143 GTRD no Epithelial (MCF-7) 21772610
chr17 53516563 53517135 ZNF143 GTRD no Epithelial (MCF-7) 21772611
chr17 53517111 53517124 POU3F3 JASPAR yes 54850872
chr17 53517111 53517125 POU1F1 JASPAR yes 54850873
chr17 53517112 53517124 POU3F1 JASPAR yes 54850874
chr17 53517112 53517124 POU3F2 JASPAR yes 54850875
chr17 53517112 53517125 DUXA JASPAR yes 54850876
chr17 53517113 53517124 DUX4 JASPAR yes 54850877
chr17 53517113 53517124 PHOX2A JASPAR yes 54850878
chr17 53517113 53517124 PROP1 JASPAR yes 54850879
chr17 53517115 53517125 POU6F2 JASPAR yes 54850880
chr17 53517116 53517126 EMX1 JASPAR yes 54850881
chr17 53517116 53517126 EMX2 JASPAR yes 54850882
chr17 53517116 53517126 ESX1 JASPAR yes 54850883
chr17 53517116 53517126 EVX1 JASPAR yes 54850884
chr17 53517116 53517126 EVX2 JASPAR yes 54850885
chr17 53517116 53517126 GBX1 JASPAR yes 54850886
chr17 53517116 53517126 HESX1 JASPAR yes 54850887
chr17 53517116 53517126 HOXA2 JASPAR yes 54850888
chr17 53517116 53517126 HOXB2 JASPAR yes 54850889
chr17 53517116 53517126 HOXB3 JASPAR yes 54850890
chr17 53517116 53517126 LBX2 JASPAR yes 54850891
chr17 53517116 53517126 LHX2 JASPAR yes 54850892
chr17 53517116 53517126 LHX6 JASPAR yes 54850893
chr17 53517116 53517126 MEOX1 JASPAR yes 54850894
chr17 53517116 53517126 MEOX2 JASPAR yes 54850895
chr17 53517116 53517126 NOTO JASPAR yes 54850896
chr17 53517116 53517126 RAX JASPAR yes 54850897
chr17 53517117 53517125 LBX1 JASPAR yes 54850898
chr17 53517117 53517125 PDX1 JASPAR yes 54850899
chr17 53517117 53517125 VAX1 JASPAR yes 54850900
chr17 53517117 53517125 VAX2 JASPAR yes 54850901
chr17 53517117 53517125 VSX1 JASPAR yes 54850902
chr17 53517117 53517125 VSX2 JASPAR yes 54850903
Genes associated with rs4794587[chr17:53517117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More