EnhancerDB
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  3. rs484034[chr1:201563666]
Enhancers that have rs484034[chr1:201563666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs484034[chr1:201563666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201561094 201563864 ZBTB33 GTRD no Brain (SK-N-SH) 21365074
chr1 201562184 201563691 ZBTB33 GTRD no Brain (SK-N-SH) 21365094
chr1 201563059 201564428 ZNF143 GTRD no Epithelial (MCF-7) 21365131
chr1 201563599 201564259 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365132
chr1 201563606 201564136 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365133
chr1 201563614 201564130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21365134
chr1 201563660 201563670 HOXA13 JASPAR yes 34511001
chr1 201563660 201563670 HOXB13 JASPAR yes 34511002
chr1 201563660 201563670 HOXD13 JASPAR yes 34511003
chr1 201563662 201564182 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21365135
Genes associated with rs484034[chr1:201563666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More