EnhancerDB
  1. Home
  2. SNP
  3. rs484200[chr12:123550962]
Enhancers that have rs484200[chr12:123550962]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123537905 123558786 enh15079
Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Heart
chr12 123546924 123551725 vista361
VISTA
Transcript factors that have rs484200[chr12:123550962]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123550943 123550963 RREB1 JASPAR yes 124315189
chr12 123550960 123550973 SMAD2 JASPAR yes 124315192
Genes associated with rs484200[chr12:123550962], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More