EnhancerDB
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  3. rs4844620[chr1:207980901]
Enhancers that have rs4844620[chr1:207980901]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4844620[chr1:207980901]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207980794 207980998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21374008
chr1 207980865 207980982 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21374009
chr1 207980890 207980904 ZIC1 JASPAR yes 34876733
chr1 207980890 207980905 ZIC3 JASPAR yes 34876734
chr1 207980890 207980905 ZIC4 JASPAR yes 34876735
chr1 207980898 207980908 SREBF1 JASPAR yes 34876736
chr1 207980898 207980908 SREBF2 JASPAR yes 34876737
Genes associated with rs4844620[chr1:207980901], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More