EnhancerDB
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  3. rs4846354[chr1:222007116]
Enhancers that have rs4846354[chr1:222007116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4846354[chr1:222007116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222006570 222007316 TEF1 GTRD no Bone (Osteoblast) 21382817
chr1 222007100 222007118 NFYA JASPAR yes 35573163
chr1 222007103 222007119 NFYA JASPAR yes 35573164
chr1 222007106 222007121 NFYB JASPAR yes 35573166
Genes associated with rs4846354[chr1:222007116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More