EnhancerDB
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  3. rs4846627[chr1:220508346]
Enhancers that have rs4846627[chr1:220508346]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220507105 220520135 enh12680
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs4846627[chr1:220508346]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220508340 220508352 HES7 JASPAR yes 35485092
chr1 220508340 220508352 PKNOX1 JASPAR yes 35485093
chr1 220508340 220508352 PKNOX2 JASPAR yes 35485094
chr1 220508340 220508352 TGIF1 JASPAR yes 35485095
chr1 220508340 220508352 TGIF2 JASPAR yes 35485096
chr1 220508341 220508351 HEY2 JASPAR yes 35485097
chr1 220508341 220508351 ID4 JASPAR yes 35485098
chr1 220508341 220508351 TCF4 JASPAR yes 35485099
chr1 220508342 220508351 SNAI2 JASPAR yes 35485100
chr1 220508343 220508348 USF2 TRANSFAC yes 35485101
chr1 220508345 220508353 MEIS3 JASPAR yes 35485102
chr1 220508346 220508350 NFE TRANSFAC yes 35485103
Genes associated with rs4846627[chr1:220508346], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More