EnhancerDB
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  3. rs489620[chr1:28569149]
Enhancers that have rs489620[chr1:28569149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28563689 28580455 enh185
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs489620[chr1:28569149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28569143 28569160 PAX1 JASPAR yes 27752864
chr1 28569144 28569163 PAX5 JASPAR yes 27752865
Genes associated with rs489620[chr1:28569149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More