EnhancerDB
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Enhancers that have rs490389[chr1:185529064]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185522965 185545824 enh816
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Stomach
chr1 185528945 185529618 vista4271
VISTA
Transcript factors that have rs490389[chr1:185529064]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185527979 185529438 ZNF274 GTRD no Bone Marrow (K562) 107852446
chr1 185528801 185529201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852447
chr1 185528989 185529381 CTCF UCSC Txn Factor no Conserved 107852448
chr1 185528997 185529357 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852449
chr1 185529002 185529598 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852450
chr1 185529005 185529375 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852451
chr1 185529024 185529312 RAD21 UCSC Txn Factor no Conserved 107852452
chr1 185529029 185529299 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852453
chr1 185529033 185529323 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107852454
chr1 185529036 185529306 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107852455
chr1 185529042 185529332 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107852456
chr1 185529043 185529273 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107852457
chr1 185529049 185529309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107852458
chr1 185529050 185529280 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107852459
chr1 185529054 185529324 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107852460
chr1 185529054 185529428 ZNF143 GTRD no Epithelial (MCF-7) 107852461
chr1 185529059 185529066 SPIB JASPAR yes 33822218
chr1 185529059 185529066 SPIB JASPAR yes 118417680
chr1 185529059 185529289 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107852462
chr1 185529060 185529304 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107852463
chr1 185529061 185529311 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107852464
chr1 185529064 185529280 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107852465
Genes associated with rs490389[chr1:185529064], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More