EnhancerDB
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  3. rs4926116[chr19:14473829]
Enhancers that have rs4926116[chr19:14473829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr19 14473667 14474081 vista28748
VISTA
Transcript factors that have rs4926116[chr19:14473829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 21853187
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391247
chr19 14470343 14477749 TCF7L2 GTRD no Colon (HCT116) 108391248
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 21853193
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 108391249
chr19 14471256 14476330 TCF7L2 GTRD no Colon (HCT116) 108391250
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 21853199
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 108391253
chr19 14471378 14474449 ZNF143 GTRD no Epithelial (MCF-7) 108391254
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 21853200
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 108391255
chr19 14471403 14474338 TCF7L2 GTRD no Colon (HCT116) 108391256
chr19 14471468 14477141 ZNF274 GTRD no Blood (GM12878) 108391257
chr19 14471468 14477141 ZNF274 GTRD no Blood (GM12878) 108391258
chr19 14473077 14474427 TCF7L2 GTRD no Colon (HCT116) 21853280
chr19 14473077 14474427 TCF7L2 GTRD no Colon (HCT116) 108391260
chr19 14473077 14474427 TCF7L2 GTRD no Colon (HCT116) 108391261
chr19 14473123 14474546 ZNF274 GTRD no Bone Marrow (K562) 21853281
chr19 14473123 14474546 ZNF274 GTRD no Bone Marrow (K562) 108391262
chr19 14473123 14474546 ZNF274 GTRD no Bone Marrow (K562) 108391263
chr19 14473147 14474005 ZNF143 GTRD no Epithelial (MCF-7) 21853282
chr19 14473147 14474005 ZNF143 GTRD no Epithelial (MCF-7) 108391264
chr19 14473177 14474204 TCF7L2 GTRD no Colon (HCT116) 21853283
chr19 14473177 14474204 TCF7L2 GTRD no Colon (HCT116) 108391265
chr19 14473177 14474204 TCF7L2 GTRD no Colon (HCT116) 108391266
chr19 14473196 14473842 ZNF274 GTRD no Blood (GM12878) 108391268
chr19 14473264 14476068 TCF7L2 GTRD no Colon (HCT116) 21853288
chr19 14473264 14476068 TCF7L2 GTRD no Colon (HCT116) 108391271
chr19 14473264 14476068 TCF7L2 GTRD no Colon (HCT116) 108391272
chr19 14473286 14474061 TCF7L2 GTRD no Colon (HCT116) 21853289
chr19 14473286 14474061 TCF7L2 GTRD no Colon (HCT116) 108391273
chr19 14473290 14473859 ZNF274 GTRD no Blood (GM12878) 108391274
chr19 14473497 14474249 ZNF274 GTRD no Blood (GM12878) 108391279
chr19 14473497 14474249 ZNF274 GTRD no Blood (GM12878) 108391280
chr19 14473509 14474062 TCF7L2 GTRD no Colon (HCT116) 21853290
chr19 14473509 14474062 TCF7L2 GTRD no Colon (HCT116) 108391281
chr19 14473817 14473830 NFKB1 JASPAR yes 70812267
chr19 14473817 14473830 NFKB2 JASPAR yes 70812268
chr19 14473817 14473830 NFKB1 JASPAR yes 112565952
chr19 14473817 14473830 NFKB2 JASPAR yes 112565953
Genes associated with rs4926116[chr19:14473829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More