EnhancerDB
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  3. rs4940728[chr18:56242449]
Enhancers that have rs4940728[chr18:56242449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4940728[chr18:56242449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56242436 56242451 FOXP1 JASPAR yes 110961703
chr18 56242436 56242457 IRF1 JASPAR yes 110961704
chr18 56242437 56242452 FOXP1 JASPAR yes 110961705
chr18 56242439 56242454 FOXP1 JASPAR yes 110961706
chr18 56242439 56242460 IRF1 JASPAR yes 110961707
chr18 56242442 56242463 IRF1 JASPAR yes 110961708
chr18 56242443 56242457 SPI1 JASPAR yes 110961709
chr18 56242445 56242466 IRF1 JASPAR yes 110961710
chr18 56242446 56242460 SPI1 JASPAR yes 110961711
chr18 56242447 56242468 ZNF263 JASPAR yes 110961712
chr18 56242448 56242469 ZNF263 JASPAR yes 110961713
chr18 56242449 56242470 IRF1 JASPAR yes 110961714
Genes associated with rs4940728[chr18:56242449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More