EnhancerDB
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  3. rs4969240[chr17:79011638]
Enhancers that have rs4969240[chr17:79011638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
chr17 79011561 79011905 vista26369
VISTA
Transcript factors that have rs4969240[chr17:79011638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79010917 79013451 AR GTRD no Prostate (PC-3) 21797514
chr17 79010917 79013451 AR GTRD no Prostate (PC-3) 108308318
chr17 79010917 79013451 AR GTRD no Prostate (PC-3) 108308319
chr17 79011021 79012627 ZNF274 GTRD no Bone Marrow (K562) 108308320
chr17 79011021 79012627 ZNF274 GTRD no Bone Marrow (K562) 108308321
chr17 79011087 79011657 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21797516
chr17 79011087 79011657 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108308323
chr17 79011087 79011657 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108308324
chr17 79011126 79011782 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21797517
chr17 79011126 79011782 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108308325
chr17 79011126 79011782 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108308326
chr17 79011355 79012134 ZNF274 GTRD no Bone Marrow (K562) 108308331
chr17 79011355 79012134 ZNF274 GTRD no Bone Marrow (K562) 108308332
chr17 79011437 79012539 ZNF274 GTRD no Cervix (HeLa-S3) 21797520
chr17 79011437 79012539 ZNF274 GTRD no Cervix (HeLa-S3) 108308333
chr17 79011438 79012126 ERG GTRD no Prostate (RWPE1) 108308334
chr17 79011439 79011835 ZBTB33 GTRD no Brain (SK-N-SH) 21797521
chr17 79011439 79011835 ZBTB33 GTRD no Brain (SK-N-SH) 108308335
chr17 79011449 79012056 ZNF274 GTRD no Bone Marrow (K562) 108308336
chr17 79011465 79012074 ZNF274 GTRD no Bone Marrow (K562) 108308337
chr17 79011508 79011937 ZNF274 GTRD no Bone Marrow (K562) 108308338
chr17 79011526 79012028 ZNF274 GTRD no Cervix (HeLa-S3) 21797522
chr17 79011526 79012028 ZNF274 GTRD no Cervix (HeLa-S3) 108308339
chr17 79011528 79012171 ZNF274 GTRD no Cervix (HeLa-S3) 21797523
chr17 79011528 79012171 ZNF274 GTRD no Cervix (HeLa-S3) 108308340
chr17 79011532 79012013 ZBTB33 GTRD no Brain (SK-N-SH) 21797524
chr17 79011532 79012013 ZBTB33 GTRD no Brain (SK-N-SH) 108308341
chr17 79011542 79012000 ZNF274 GTRD no Bone Marrow (K562) 108308342
chr17 79011562 79011928 ZNF274 GTRD no Bone Marrow (K562) 108308343
chr17 79011594 79012030 TCF7L2 GTRD no Colon (HCT116) 21797525
chr17 79011594 79012030 TCF7L2 GTRD no Colon (HCT116) 108308344
chr17 79011607 79011918 TCF7L2 GTRD no Colon (HCT116) 21797526
chr17 79011607 79011918 TCF7L2 GTRD no Colon (HCT116) 108308345
chr17 79011617 79011982 ZNF143 GTRD no Epithelial (MCF-7) 21797527
chr17 79011617 79011982 ZNF143 GTRD no Epithelial (MCF-7) 108308346
chr17 79011621 79011963 ZNF274 GTRD no Bone Marrow (K562) 108308347
chr17 79011623 79012298 ZNF274 GTRD no Bone Marrow (K562) 108308348
chr17 79011631 79011642 ESRRA JASPAR yes 21316661
chr17 79011631 79011642 ESRRA JASPAR yes 56299587
chr17 79011634 79011655 REST JASPAR yes 21316662
chr17 79011634 79011655 REST JASPAR yes 56299588
chr17 79011637 79011644 E2F1 TRANSFAC yes 21316663
chr17 79011637 79011644 E2F1 TRANSFAC yes 56299589
Genes associated with rs4969240[chr17:79011638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More