EnhancerDB
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  3. rs498501[chr1:28568258]
Enhancers that have rs498501[chr1:28568258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28563689 28580455 enh185
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs498501[chr1:28568258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28568249 28568265 RFX2 JASPAR yes 27752740
chr1 28568249 28568265 RFX3 JASPAR yes 27752741
chr1 28568249 28568265 RFX4 JASPAR yes 27752742
chr1 28568249 28568265 RFX5 JASPAR yes 27752743
chr1 28568250 28568269 RFX2 JASPAR yes 27752744
chr1 28568251 28568262 RUNX1 JASPAR yes 27752746
chr1 28568252 28568267 RFX5 JASPAR yes 27752747
Genes associated with rs498501[chr1:28568258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More