EnhancerDB
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  3. rs527255890[chr12:116701124]
Enhancers that have rs527255890[chr12:116701124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116692978 116713706 enh51416
Large Intestine Ovary Esophagus Muscle (A673) Colon (HCT116) Adrenal Lung (PC-9) Neural Stem Cells (H9) Stomach
chr12 116701070 116701373 vista15012
VISTA
Transcript factors that have rs527255890[chr12:116701124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116700298 116701203 P63 GTRD no Skin (Keratinocyte) 108061224
chr12 116700313 116701165 P63 GTRD no Skin (Keratinocyte) 108061225
chr12 116700431 116701205 P63 GTRD no Skin (Keratinocyte) 108061226
chr12 116701115 116701133 SRF JASPAR yes 82482802
chr12 116701115 116701133 SRF JASPAR yes 123974402
chr12 116701117 116701132 MEF2C JASPAR yes 82482803
chr12 116701117 116701132 MEF2C JASPAR yes 123974403
chr12 116701120 116701141 IRF1 JASPAR yes 82482804
chr12 116701120 116701141 IRF1 JASPAR yes 123974404
chr12 116701122 116701137 IRF9 JASPAR yes 82482805
chr12 116701122 116701137 IRF9 JASPAR yes 123974405
chr12 116701123 116701137 IRF7 JASPAR yes 82482806
chr12 116701123 116701137 IRF7 JASPAR yes 123974406
chr12 116701124 116701138 STAT1 JASPAR yes 82482807
chr12 116701124 116701138 STAT1 JASPAR yes 123974407
chr12 116701124 116701139 PRDM1 JASPAR yes 82482808
chr12 116701124 116701139 STAT2 JASPAR yes 82482809
chr12 116701124 116701139 PRDM1 JASPAR yes 123974408
chr12 116701124 116701139 STAT2 JASPAR yes 123974409
Genes associated with rs527255890[chr12:116701124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More