EnhancerDB
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Enhancers that have rs527349792[chr17:42624950]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42617298 42627575 enh17183
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Stomach
chr17 42624802 42626014 vista696
VISTA
Transcript factors that have rs527349792[chr17:42624950]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 21762454
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 107688166
chr17 42623205 42625028 ZNF274 GTRD no Bone Marrow (K562) 108263060
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 21762458
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 107688168
chr17 42623340 42624968 ZNF274 GTRD no Cervix (HeLa-S3) 108263062
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 21762459
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 107688170
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263064
chr17 42623541 42625545 ZNF274 GTRD no Bone Marrow (K562) 108263065
chr17 42623880 42624982 ZBTB33 GTRD no Lung (A549) 107688178
chr17 42623880 42624982 ZBTB33 GTRD no Lung (A549) 108263086
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21762555
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107688200
chr17 42624442 42625092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263217
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 21762562
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 107688202
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 108263226
chr17 42624789 42625248 TCF7L2 GTRD no Colon (HCT116) 108263227
chr17 42624946 42624957 NFKB1 JASPAR yes 14100
chr17 42624946 42624957 NFKB1 JASPAR yes 54406205
chr17 42624947 42624952 ETS2 TRANSFAC yes 14101
chr17 42624947 42624952 ETS2 TRANSFAC yes 54406206
Genes associated with rs527349792[chr17:42624950], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More