EnhancerDB
  1. Home
  2. SNP
  3. rs527394688[chr19:3387161]
Enhancers that have rs527394688[chr19:3387161]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs527394688[chr19:3387161]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 21839142
chr19 3386265 3389100 TCF7L2 GTRD no Colon (HCT116) 108366435
chr19 3387135 3388928 ZNF143 GTRD no Epithelial (MCF-7) 21839143
chr19 3387135 3388928 ZNF143 GTRD no Epithelial (MCF-7) 108366436
chr19 3387141 3387162 ZNF263 JASPAR yes 112126693
chr19 3387158 3387162 LFA1 TRANSFAC yes 112126696
chr19 3387158 3387170 HES7 JASPAR yes 112126697
chr19 3387159 3387169 HEY2 JASPAR yes 112126698
chr19 3387159 3387169 ID4 JASPAR yes 112126699
chr19 3387159 3387169 TCF4 JASPAR yes 112126700
chr19 3387159 3387180 REST JASPAR yes 112126701
chr19 3387160 3387169 SNAI2 JASPAR yes 112126702
chr19 3387160 3387179 REST JASPAR yes 112126703
chr19 3387161 3387166 USF2 TRANSFAC yes 112126704
Genes associated with rs527394688[chr19:3387161], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More