EnhancerDB
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  3. rs527509083[chr1:169749698]
Enhancers that have rs527509083[chr1:169749698]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169743545 169752855 enh12362
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Astrocyte Placenta Colon (HCT116) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs527509083[chr1:169749698]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169749688 169749698 HOXA13 JASPAR yes 33014513
chr1 169749688 169749698 HOXB13 JASPAR yes 33014514
chr1 169749688 169749698 HOXD13 JASPAR yes 33014515
chr1 169749688 169749699 HOXA10 JASPAR yes 33014516
chr1 169749689 169749698 CDX1 JASPAR yes 33014517
chr1 169749689 169749700 CDX2 JASPAR yes 33014518
chr1 169749693 169749708 FOXA1 JASPAR yes 33014519
chr1 169749695 169749707 FOXC2 JASPAR yes 33014520
chr1 169749696 169749707 FOXB1 JASPAR yes 33014521
chr1 169749696 169749707 FOXC1 JASPAR yes 33014522
chr1 169749697 169749701 YY1 TRANSFAC yes 33014523
chr1 169749697 169749708 FOXA1 JASPAR yes 33014524
Genes associated with rs527509083[chr1:169749698], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More