EnhancerDB
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  3. rs527564873[chr1:3240442]
Enhancers that have rs527564873[chr1:3240442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs527564873[chr1:3240442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3240428 3240442 PLAG1 JASPAR yes 26279903
chr1 3240434 3240445 NFKB1 JASPAR yes 26279904
chr1 3240434 3240447 NFKB1 JASPAR yes 26279905
chr1 3240434 3240447 NFKB2 JASPAR yes 26279906
chr1 3240435 3240445 NFKB1 JASPAR yes 26279907
chr1 3240435 3240446 NFKB1 JASPAR yes 26279908
chr1 3240439 3240447 SP1 TRANSFAC yes 26279909
Genes associated with rs527564873[chr1:3240442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More