EnhancerDB
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  3. rs527590998[chr12:92943255]
Enhancers that have rs527590998[chr12:92943255]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92931041 92959835 enh14884
Liver Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs527590998[chr12:92943255]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92942619 92943371 ZNF143 GTRD no Epithelial (MCF-7) 21562636
chr12 92942650 92943404 ZNF143 GTRD no Epithelial (MCF-7) 21562637
chr12 92942718 92943281 ZNF143 GTRD no Epithelial (MCF-7) 21562640
chr12 92942725 92943298 ZNF143 GTRD no Epithelial (MCF-7) 21562641
chr12 92942749 92943460 ZNF143 GTRD no Epithelial (MCF-7) 21562642
chr12 92942764 92943374 ZNF143 GTRD no Epithelial (MCF-7) 21562643
chr12 92942798 92943395 ZNF143 GTRD no Epithelial (MCF-7) 21562645
chr12 92942802 92943428 ZNF143 GTRD no Epithelial (MCF-7) 21562646
chr12 92942814 92943476 ZNF143 GTRD no Epithelial (MCF-7) 21562647
chr12 92942830 92943337 ZNF143 GTRD no Epithelial (MCF-7) 21562650
chr12 92942837 92943261 ZNF143 GTRD no Epithelial (MCF-7) 21562651
chr12 92943253 92943258 SP1 TRANSFAC yes 122780797
chr12 92943253 92943262 THAP1 JASPAR yes 122780798
chr12 92943253 92943264 GCM1 JASPAR yes 122780799
chr12 92943254 92943264 GCM2 JASPAR yes 122780800
Genes associated with rs527590998[chr12:92943255], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More