EnhancerDB
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  3. rs527623640[chr1:90419304]
Enhancers that have rs527623640[chr1:90419304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs527623640[chr1:90419304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90419290 90419304 ONECUT2 JASPAR yes 30638199
chr1 90419290 90419304 ONECUT3 JASPAR yes 30638200
chr1 90419291 90419312 IRF1 JASPAR yes 30638201
chr1 90419292 90419307 FOXP1 JASPAR yes 30638202
chr1 90419293 90419305 FOXC2 JASPAR yes 30638204
chr1 90419294 90419309 FOXP1 JASPAR yes 30638205
chr1 90419297 90419318 IRF1 JASPAR yes 30638206
chr1 90419301 90419305 YY1 TRANSFAC yes 30638207
Genes associated with rs527623640[chr1:90419304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More