EnhancerDB
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  3. rs527709887[chr17:39939348]
Enhancers that have rs527709887[chr17:39939348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39926525 39940665 enh17154
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs527709887[chr17:39939348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39939345 39939360 FOXP1 JASPAR yes 54275934
chr17 39939346 39939361 FOXP1 JASPAR yes 54275935
chr17 39939347 39939362 FOXP1 JASPAR yes 54275936
chr17 39939348 39939363 FOXP1 JASPAR yes 54275937
chr17 39939348 39939369 IRF1 JASPAR yes 54275938
Genes associated with rs527709887[chr17:39939348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More