EnhancerDB
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  3. rs527728873[chr16:4227878]
Enhancers that have rs527728873[chr16:4227878]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4220093 4236577 enh16512
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs527728873[chr16:4227878]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4227272 4228158 P63 GTRD no Skin (Keratinocyte) 21686120
chr16 4227437 4228113 P63 GTRD no Skin (Keratinocyte) 21686121
chr16 4227531 4227920 P63 GTRD no Skin (Keratinocyte) 21686123
chr16 4227796 4228217 TCF7L2 GTRD no Colon (HCT116) 21686124
chr16 4227865 4227880 FOXP1 JASPAR yes 9260536
chr16 4227866 4227881 FOXP1 JASPAR yes 9260537
chr16 4227866 4227887 IRF1 JASPAR yes 9260538
chr16 4227867 4227882 FOXP1 JASPAR yes 9260539
chr16 4227869 4227884 FOXP1 JASPAR yes 9260540
chr16 4227870 4227885 STAT2 JASPAR yes 9260541
chr16 4227871 4227886 FOXP1 JASPAR yes 9260542
chr16 4227871 4227892 IRF1 JASPAR yes 9260543
chr16 4227873 4227885 FOXC2 JASPAR yes 9260544
chr16 4227873 4227893 RREB1 JASPAR yes 9260545
chr16 4227874 4227885 FOXP2 JASPAR yes 9260546
chr16 4227875 4227890 STAT2 JASPAR yes 9260547
chr16 4227876 4227888 IRF1 JASPAR yes 9260548
chr16 4227876 4227891 FOXP1 JASPAR yes 9260549
chr16 4227876 4227897 IRF1 JASPAR yes 9260550
chr16 4227877 4227898 IRF1 JASPAR yes 9260551
chr16 4227878 4227898 RREB1 JASPAR yes 9260552
Genes associated with rs527728873[chr16:4227878], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More