EnhancerDB
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  3. rs527885443[chr15:40336204]
Enhancers that have rs527885443[chr15:40336204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs527885443[chr15:40336204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40335055 40336331 TCF7L2 GTRD no Colon (HCT116) 21649141
chr15 40335608 40336825 TCF7L2 GTRD no Colon (HCT116) 21649142
chr15 40336151 40337010 TCF7L2 GTRD no Colon (HCT116) 21649143
chr15 40336183 40336204 IRF1 JASPAR yes 22922305
chr15 40336189 40336204 FOXP1 JASPAR yes 22922311
Genes associated with rs527885443[chr15:40336204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More