EnhancerDB
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  3. rs528001727[chr13:111838357]
Enhancers that have rs528001727[chr13:111838357]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111812424 111849400 enh3020
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Heart
Transcript factors that have rs528001727[chr13:111838357]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111838339 111838359 RREB1 JASPAR yes 60392006
chr13 111838346 111838361 FOXP1 JASPAR yes 60392007
chr13 111838346 111838367 IRF1 JASPAR yes 60392008
chr13 111838347 111838362 STAT2 JASPAR yes 60392009
chr13 111838348 111838363 STAT2 JASPAR yes 60392010
chr13 111838349 111838363 STAT1 JASPAR yes 60392011
chr13 111838350 111838362 IRF1 JASPAR yes 60392012
chr13 111838350 111838364 IRF7 JASPAR yes 60392013
chr13 111838350 111838364 IRF8 JASPAR yes 60392014
chr13 111838350 111838365 IRF9 JASPAR yes 60392015
Genes associated with rs528001727[chr13:111838357], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More