EnhancerDB
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  3. rs528048608[chr17:54857519]
Enhancers that have rs528048608[chr17:54857519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 54855245 54867175 enh32239
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Colon (HCT116) Breast Peripheral Blood (MM.1S) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs528048608[chr17:54857519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 54856871 54857683 ZNF143 GTRD no Epithelial (MCF-7) 21772995
chr17 54856871 54857683 ZNF143 GTRD no Epithelial (MCF-7) 108273180
chr17 54856871 54857683 ZNF143 GTRD no Epithelial (MCF-7) 108273181
chr17 54856989 54857531 ZNF143 GTRD no Epithelial (MCF-7) 21772997
chr17 54856989 54857531 ZNF143 GTRD no Epithelial (MCF-7) 108273183
chr17 54856989 54857531 ZNF143 GTRD no Epithelial (MCF-7) 108273184
chr17 54857450 54857970 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108273185
chr17 54857462 54857938 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772998
chr17 54857462 54857938 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273186
chr17 54857504 54858034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772999
chr17 54857504 54858034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273187
chr17 54857511 54858007 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773000
chr17 54857511 54858007 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273188
chr17 54857512 54858028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773001
chr17 54857512 54858028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273189
chr17 54857517 54857529 TEAD1 JASPAR yes 21258203
chr17 54857517 54857529 TEAD1 JASPAR yes 54912155
chr17 54857519 54857529 TEAD1 JASPAR yes 21258204
chr17 54857519 54857529 TEAD4 JASPAR yes 21258205
chr17 54857519 54857529 TEAD1 JASPAR yes 54912156
chr17 54857519 54857529 TEAD4 JASPAR yes 54912157
Genes associated with rs528048608[chr17:54857519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More