EnhancerDB
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  3. rs528096540[chr1:228972550]
Enhancers that have rs528096540[chr1:228972550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs528096540[chr1:228972550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228972184 228972624 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388846
chr1 228972184 228972624 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877481
chr1 228972189 228972569 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388847
chr1 228972189 228972569 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877482
chr1 228972203 228972563 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388849
chr1 228972203 228972563 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877484
chr1 228972238 228972578 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388851
chr1 228972238 228972578 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877486
chr1 228972296 228972666 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388855
chr1 228972296 228972666 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877490
chr1 228972319 228972552 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388858
chr1 228972319 228972552 FOXA2 UCSC Txn Factor no Conserved 107877493
chr1 228972319 228972552 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877494
chr1 228972324 228972561 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388859
chr1 228972324 228972561 FOXA1 UCSC Txn Factor no Conserved 107877495
chr1 228972324 228972561 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877496
chr1 228972326 228972550 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388860
chr1 228972326 228972550 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877497
chr1 228972411 228972611 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21388861
chr1 228972411 228972611 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107877498
Genes associated with rs528096540[chr1:228972550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More