EnhancerDB
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  3. rs528406081[chr1:27035056]
Enhancers that have rs528406081[chr1:27035056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27017585 27036395 enh166
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Epithelial (MCF-7) Stomach Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs528406081[chr1:27035056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27035047 27035056 SNAI2 JASPAR yes 27651127
chr1 27035047 27035057 ID4 JASPAR yes 27651128
chr1 27035047 27035057 TCF3 JASPAR yes 27651129
chr1 27035047 27035057 TCF4 JASPAR yes 27651130
chr1 27035049 27035058 ZEB1 JASPAR yes 27651131
chr1 27035050 27035058 TBX15 JASPAR yes 27651132
chr1 27035050 27035058 TBX4 JASPAR yes 27651133
chr1 27035050 27035063 SMAD2 JASPAR yes 27651134
Genes associated with rs528406081[chr1:27035056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More