EnhancerDB
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  3. rs528715299[chr17:78800449]
Enhancers that have rs528715299[chr17:78800449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78797749 78810595 enh4639
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs528715299[chr17:78800449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78800116 78801014 TCF7L2 GTRD no Colon (HCT116) 21797361
chr17 78800116 78801014 TCF7L2 GTRD no Colon (HCT116) 108307645
chr17 78800141 78801019 TCF7L2 GTRD no Colon (HCT116) 21797362
chr17 78800141 78801019 TCF7L2 GTRD no Colon (HCT116) 108307646
chr17 78800144 78800953 TCF7L2 GTRD no Colon (HCT116) 21797363
chr17 78800144 78800953 TCF7L2 GTRD no Colon (HCT116) 108307647
chr17 78800155 78800910 ZNF143 GTRD no Epithelial (MCF-7) 21797364
chr17 78800155 78800910 ZNF143 GTRD no Epithelial (MCF-7) 108307648
chr17 78800167 78801047 ZNF143 GTRD no Epithelial (MCF-7) 21797365
chr17 78800167 78801047 ZNF143 GTRD no Epithelial (MCF-7) 108307649
chr17 78800197 78801024 TCF7L2 GTRD no Colon (HCT116) 21797366
chr17 78800197 78801024 TCF7L2 GTRD no Colon (HCT116) 108307650
chr17 78800206 78801023 ZNF143 GTRD no Epithelial (MCF-7) 21797367
chr17 78800206 78801023 ZNF143 GTRD no Epithelial (MCF-7) 108307651
chr17 78800444 78800456 PKNOX1 JASPAR yes 56283847
chr17 78800444 78800456 PKNOX2 JASPAR yes 56283848
chr17 78800444 78800456 TGIF1 JASPAR yes 56283849
chr17 78800444 78800456 TGIF2 JASPAR yes 56283850
chr17 78800448 78800466 ESR2 JASPAR yes 56283851
chr17 78800449 78800466 ESR1 JASPAR yes 56283852
Genes associated with rs528715299[chr17:78800449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More