EnhancerDB
  1. Home
  2. SNP
  3. rs528939562[chr1:9372799]
Enhancers that have rs528939562[chr1:9372799]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9371725 9388955 enh11483
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs528939562[chr1:9372799]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9372779 9372799 RREB1 JASPAR yes 26636566
chr1 9372789 9372801 IRF1 JASPAR yes 26636567
chr1 9372790 9372808 IRF2 JASPAR yes 26636568
chr1 9372795 9372807 IRF1 JASPAR yes 26636569
chr1 9372796 9372806 HOXA13 JASPAR yes 26636570
chr1 9372796 9372806 HOXB13 JASPAR yes 26636571
chr1 9372796 9372806 HOXD13 JASPAR yes 26636572
chr1 9372796 9372807 HOXA10 JASPAR yes 26636573
chr1 9372797 9372806 CDX1 JASPAR yes 26636574
chr1 9372797 9372808 CDX2 JASPAR yes 26636575
chr1 9372798 9372810 MEF2A JASPAR yes 26636576
chr1 9372798 9372810 MEF2B JASPAR yes 26636577
chr1 9372798 9372810 MEF2D JASPAR yes 26636578
Genes associated with rs528939562[chr1:9372799], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More