EnhancerDB
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  3. rs528944952[chr1:228967598]
Enhancers that have rs528944952[chr1:228967598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs528944952[chr1:228967598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228967577 228967598 IRF1 JASPAR yes 35933408
chr1 228967578 228967599 IRF1 JASPAR yes 35933411
chr1 228967579 228967600 IRF1 JASPAR yes 35933413
chr1 228967580 228967601 IRF1 JASPAR yes 35933415
chr1 228967581 228967602 IRF1 JASPAR yes 35933417
chr1 228967582 228967603 IRF1 JASPAR yes 35933419
chr1 228967583 228967598 FOXP1 JASPAR yes 35933420
chr1 228967583 228967604 IRF1 JASPAR yes 35933421
chr1 228967584 228967599 FOXP1 JASPAR yes 35933422
chr1 228967584 228967605 IRF1 JASPAR yes 35933423
chr1 228967585 228967600 FOXP1 JASPAR yes 35933424
chr1 228967587 228967602 FOXP1 JASPAR yes 35933425
chr1 228967588 228967603 STAT2 JASPAR yes 35933426
chr1 228967589 228967604 FOXP1 JASPAR yes 35933427
chr1 228967592 228967603 FOXP2 JASPAR yes 35933428
chr1 228967596 228967602 HiNF-A TRANSFAC yes 35933429
Genes associated with rs528944952[chr1:228967598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More