EnhancerDB
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  3. rs529068703[chr1:40293873]
Enhancers that have rs529068703[chr1:40293873]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs529068703[chr1:40293873]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40293860 40293873 SMAD2 JASPAR yes 28294354
chr1 40293863 40293873 TBR1 JASPAR yes 28294355
chr1 40293864 40293874 TBX21 JASPAR yes 28294356
chr1 40293865 40293873 MGA JASPAR yes 28294357
chr1 40293865 40293873 TBX15 JASPAR yes 28294358
chr1 40293865 40293873 TBX1 JASPAR yes 28294359
chr1 40293865 40293873 TBX4 JASPAR yes 28294360
chr1 40293865 40293873 TBX5 JASPAR yes 28294361
chr1 40293865 40293874 ZEB1 JASPAR yes 28294362
chr1 40293865 40293877 PKNOX1 JASPAR yes 28294363
chr1 40293865 40293877 TGIF1 JASPAR yes 28294364
chr1 40293865 40293878 ZBTB18 JASPAR yes 28294365
chr1 40293866 40293876 FIGLA JASPAR yes 28294366
chr1 40293866 40293876 ID4 JASPAR yes 28294367
chr1 40293866 40293876 TCF3 JASPAR yes 28294368
chr1 40293866 40293876 TCF4 JASPAR yes 28294369
chr1 40293867 40293876 SNAI2 JASPAR yes 28294370
chr1 40293868 40293873 USF2 TRANSFAC yes 28294371
Genes associated with rs529068703[chr1:40293873], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More