EnhancerDB
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  3. rs529239474[chr17:79696414]
Enhancers that have rs529239474[chr17:79696414]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79687096 79705379 enh17447
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs529239474[chr17:79696414]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79694572 79696980 TCF7L2 GTRD no Colon (HCT116) 21798278
chr17 79694606 79697345 TCF7L2 GTRD no Colon (HCT116) 21798281
chr17 79694625 79696438 ZNF143 GTRD no Epithelial (MCF-7) 21798282
chr17 79694658 79696965 TCF7L2 GTRD no Colon (HCT116) 21798284
chr17 79695114 79696462 ZNF143 GTRD no Epithelial (MCF-7) 21798293
chr17 79695453 79696441 ZNF143 GTRD no Epithelial (MCF-7) 21798294
chr17 79695455 79696490 ZNF143 GTRD no Epithelial (MCF-7) 21798295
chr17 79696055 79697711 TCF7L2 GTRD no Colon (HCT116) 21798304
chr17 79696070 79696577 TCF7L2 GTRD no Colon (HCT116) 21798305
chr17 79696396 79696415 PAX5 JASPAR yes 56340135
Genes associated with rs529239474[chr17:79696414], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More