EnhancerDB
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  3. rs529280353[chr12:123583032]
Enhancers that have rs529280353[chr12:123583032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123565265 123589735 enh2666
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs529280353[chr12:123583032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123581826 123583054 ZBTB33 GTRD no Lung (A549) 108066882
chr12 123581835 123583192 ZNF274 GTRD no Bone Marrow (K562) 21580193
chr12 123581835 123583192 ZNF274 GTRD no Bone Marrow (K562) 108066883
chr12 123581931 123583712 ZNF274 GTRD no Blood (GM12878) 108066895
chr12 123581931 123583712 ZNF274 GTRD no Blood (GM12878) 108066896
chr12 123581962 123583144 ZBTB33 GTRD no Lung (A549) 108066899
chr12 123581967 123586439 ZNF274 GTRD no Bone Marrow (K562) 21580201
chr12 123581967 123586439 ZNF274 GTRD no Bone Marrow (K562) 108066900
chr12 123581967 123586439 ZNF274 GTRD no Bone Marrow (K562) 108066901
chr12 123581988 123585877 ZNF143 GTRD no Epithelial (MCF-7) 21580207
chr12 123581988 123585877 ZNF143 GTRD no Epithelial (MCF-7) 108066909
chr12 123581988 123585877 ZNF143 GTRD no Epithelial (MCF-7) 108066910
chr12 123582002 123583081 ZNF274 GTRD no Blood (GM12878) 108066913
chr12 123582020 123583098 ZNF274 GTRD no Bone Marrow (K562) 21580214
chr12 123582020 123583098 ZNF274 GTRD no Bone Marrow (K562) 108066922
chr12 123582022 123583034 ZBTB33 GTRD no Lung (A549) 108066923
chr12 123582031 123583052 ZBTB33 GTRD no Lung (A549) 108066928
chr12 123582071 123583034 ZBTB33 GTRD no Lung (A549) 108066944
chr12 123582494 123585960 ZNF274 GTRD no Bone Marrow (K562) 21580263
chr12 123582494 123585960 ZNF274 GTRD no Bone Marrow (K562) 108066988
chr12 123582494 123585960 ZNF274 GTRD no Bone Marrow (K562) 108066989
chr12 123582747 123586004 ZNF274 GTRD no Liver (HepG2) 21580264
chr12 123582747 123586004 ZNF274 GTRD no Liver (HepG2) 108066990
chr12 123582911 123585535 TCF7L2 GTRD no Colon (HCT116) 21580265
chr12 123582911 123585535 TCF7L2 GTRD no Colon (HCT116) 108066991
chr12 123582921 123583579 ZNF274 GTRD no Cervix (HeLa-S3) 21580266
chr12 123582921 123583579 ZNF274 GTRD no Cervix (HeLa-S3) 108066992
chr12 123583015 123585263 TCF7L2 GTRD no Colon (HCT116) 21580267
chr12 123583015 123585263 TCF7L2 GTRD no Colon (HCT116) 108066993
chr12 123583024 123583035 USF1 JASPAR yes 124318399
chr12 123583024 123583035 USF2 JASPAR yes 124318400
chr12 123583025 123583035 TFEC JASPAR yes 124318401
chr12 123583032 123583050 RARA JASPAR yes 124318402
Genes associated with rs529280353[chr12:123583032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More