EnhancerDB
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  3. rs529311441[chr16:88309079]
Enhancers that have rs529311441[chr16:88309079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs529311441[chr16:88309079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88308342 88310654 ZNF143 GTRD no Epithelial (MCF-7) 21735815
chr16 88308430 88310527 ZNF143 GTRD no Epithelial (MCF-7) 21735816
chr16 88308435 88309601 TCF7L2 GTRD no Colon (HCT116) 21735817
chr16 88308446 88310554 ZNF143 GTRD no Epithelial (MCF-7) 21735818
chr16 88308453 88309546 ZNF143 GTRD no Epithelial (MCF-7) 21735819
chr16 88308454 88310527 ZNF143 GTRD no Epithelial (MCF-7) 21735820
chr16 88308477 88310390 ZNF143 GTRD no Epithelial (MCF-7) 21735821
chr16 88308482 88310390 ZNF143 GTRD no Epithelial (MCF-7) 21735822
chr16 88308523 88310733 TCF7L2 GTRD no Colon (HCT116) 21735823
chr16 88308651 88309275 ZNF143 GTRD no Epithelial (MCF-7) 21735824
chr16 88308675 88309315 ZNF143 GTRD no Epithelial (MCF-7) 21735825
chr16 88308709 88309097 ZNF143 GTRD no Epithelial (MCF-7) 21735826
chr16 88308783 88310436 TCF7L2 GTRD no Colon (HCT116) 21735827
chr16 88308790 88309125 ZNF274 GTRD no Cervix (HeLa-S3) 21735828
chr16 88308827 88310359 TCF7L2 GTRD no Colon (HCT116) 21735829
chr16 88308832 88309091 ZNF274 GTRD no Cervix (HeLa-S3) 21735830
chr16 88308843 88310355 TCF7L2 GTRD no Colon (HCT116) 21735831
chr16 88309077 88309091 PLAG1 JASPAR yes 12273231
Genes associated with rs529311441[chr16:88309079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More