EnhancerDB
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  3. rs529450817[chr19:13162006]
Enhancers that have rs529450817[chr19:13162006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs529450817[chr19:13162006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13161563 13165302 TCF7L2 GTRD no Colon (HCT116) 21850467
chr19 13161563 13165302 TCF7L2 GTRD no Colon (HCT116) 107690197
chr19 13161563 13165302 TCF7L2 GTRD no Colon (HCT116) 108388199
chr19 13161827 13165835 ZNF274 GTRD no Blood (GM12878) 107690198
chr19 13161827 13165835 ZNF274 GTRD no Blood (GM12878) 108388200
chr19 13161922 13165407 ZNF274 GTRD no Blood (GM12878) 107690199
chr19 13161922 13165407 ZNF274 GTRD no Blood (GM12878) 108388201
chr19 13161972 13165703 ZNF274 GTRD no Blood (GM12878) 107690200
chr19 13161972 13165703 ZNF274 GTRD no Blood (GM12878) 108388202
Genes associated with rs529450817[chr19:13162006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More