EnhancerDB
  1. Home
  2. SNP
  3. rs529780478[chr1:9607289]
Enhancers that have rs529780478[chr1:9607289]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs529780478[chr1:9607289]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9607287 9607298 USF1 JASPAR yes 26660167
chr1 9607287 9607298 USF2 JASPAR yes 26660168
chr1 9607288 9607298 SREBF2 JASPAR yes 26660169
Genes associated with rs529780478[chr1:9607289], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More